STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2160Hypothetical protein; Identified by Glimmer2; putative. (191 aa)    
Predicted Functional Partners:
flaEY
Regulatory protein FlaEY; Functions in trans to modulate the level of transcription of the flagellin genes and several genes encoding chemotaxis functions. It is itself temporally controlled.
  
     0.743
CC_0898
Flagellin, putative; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
     0.695
CC_3231
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.690
CC_1485
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.649
CC_2159
Hypothetical protein; Identified by Glimmer2; putative.
       0.631
CC_1380
Poly-beta-hydroxybutyrate polymerase; Identified by match to protein family HMM.
 
  
 0.622
CC_1220
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.616
flaF
flaF protein; Required for synthesis of the 25 kDa and 27 kDa flagellins and appears to be important for flagellin assembly.
  
     0.585
CC_0730
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.567
CC_2161
D-alanyl-D-alanine carboxypeptidase; Identified by match to PFAM protein family HMM PF00768; Belongs to the peptidase S11 family.
       0.560
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.