STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2175FliN family protein; Identified by match to PFAM protein family HMM PF01052. (103 aa)    
Predicted Functional Partners:
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).
 
 0.994
flbE
flbE protein; Similar to GB:M98855 SP:Q04953 PID:144249; identified by sequence similarity; putative.
 
 
 0.979
ispDF
Conserved hypothetical protein; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
   
   0.965
fliE
Flagellar hook-basal body complex protein FliE; Identified by match to TIGR protein family HMM TIGR00205.
 
  
 0.956
FlgB
Flagellar basal-body rod protein FlgB, putative; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.953
cheL
Chemotactic signal-response protein CheL; Similar to GB:M91448 SP:P33980 PID:144242; identified by sequence similarity; putative.
 
  
 0.952
CC_0899
Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
 
 0.947
CC_2059
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.947
flaD
Distal basal-body ring component protein FlaD; FlaD might be the structural protein of the distal basal body ring P, or it is necessary for the assembly of the P ring.
 
  
 0.942
CC_3471
Chemotaxis protein CheYIV; Identified by match to protein family HMM.
  
 0.935
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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