Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0493 | CC_2200 | CC_0493 | CC_2200 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to PFAM protein family HMM PF01844. | 0.521 |
| CC_1437 | CC_2200 | CC_1437 | CC_2200 | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | Identified by match to PFAM protein family HMM PF01844. | 0.770 |
| CC_1437 | rpmB | CC_1437 | CC_0661 | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | Ribosomal protein L28; Identified by match to TIGR protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family. | 0.607 |
| CC_2004 | CC_2200 | CC_2004 | CC_2200 | Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Identified by match to PFAM protein family HMM PF01844. | 0.422 |
| CC_2200 | CC_0493 | CC_2200 | CC_0493 | Identified by match to PFAM protein family HMM PF01844. | Hypothetical protein; Identified by Glimmer2; putative. | 0.521 |
| CC_2200 | CC_1437 | CC_2200 | CC_1437 | Identified by match to PFAM protein family HMM PF01844. | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | 0.770 |
| CC_2200 | CC_2004 | CC_2200 | CC_2004 | Identified by match to PFAM protein family HMM PF01844. | Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.422 |
| CC_2200 | CC_2201 | CC_2200 | CC_2201 | Identified by match to PFAM protein family HMM PF01844. | DNA-3-methyladenine glycosylase, putative; Identified by match to protein family HMM. | 0.519 |
| CC_2200 | ccrMIM | CC_2200 | CC_0378 | Identified by match to PFAM protein family HMM PF01844. | Modification methylase CcrMI; This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. Ccrm-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication and cellular morphology; Belongs to the N(4)/N(6)-methyltransferase family. | 0.538 |
| CC_2200 | rpmB | CC_2200 | CC_0661 | Identified by match to PFAM protein family HMM PF01844. | Ribosomal protein L28; Identified by match to TIGR protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family. | 0.443 |
| CC_2201 | CC_2200 | CC_2201 | CC_2200 | DNA-3-methyladenine glycosylase, putative; Identified by match to protein family HMM. | Identified by match to PFAM protein family HMM PF01844. | 0.519 |
| ccrMIM | CC_2200 | CC_0378 | CC_2200 | Modification methylase CcrMI; This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. Ccrm-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication and cellular morphology; Belongs to the N(4)/N(6)-methyltransferase family. | Identified by match to PFAM protein family HMM PF01844. | 0.538 |
| rpmB | CC_1437 | CC_0661 | CC_1437 | Ribosomal protein L28; Identified by match to TIGR protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family. | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | 0.607 |
| rpmB | CC_2200 | CC_0661 | CC_2200 | Ribosomal protein L28; Identified by match to TIGR protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family. | Identified by match to PFAM protein family HMM PF01844. | 0.443 |