STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2218Hypothetical protein; Identified by Glimmer2; putative. (205 aa)    
Predicted Functional Partners:
CC_2217
Hypothetical protein; Identified by Glimmer2; putative.
     0.966
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
     0.866
CC_2219
1-acyl-sn-glycerol-3-phosphate acyltransferase; Identified by match to PFAM protein family HMM PF01553.
       0.810
CC_1652
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.678
CC_2932
Sensor histidine kinase; Identified by match to protein family HMM.
  
     0.673
CC_2215
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.662
lptD
Conserved hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
    0.632
CC_1725
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.621
CC_2214
Hypoxanthine-guanine phosphoribosyltransferase; Identified by match to protein family HMM.
       0.608
CC_3231
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.595
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.