STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2227Identified by match to PFAM protein family HMM PF00759. (620 aa)    
Predicted Functional Partners:
CC_0797
1,4-beta-D-glucan glucohydrolase D; Identified by match to protein family HMM.
  
  
 0.937
CC_2052
1,4-beta-D-glucan glucohydrolase D; Identified by match to protein family HMM.
  
  
 0.935
CC_2136
Beta-glucosidase; Identified by match to protein family HMM.
    
 0.912
CC_0968
beta-D-glucosidase; Identified by match to protein family HMM.
   
 
 0.904
CC_1105
Periplasmic beta-glucosidase; Identified by match to protein family HMM; Belongs to the glycosyl hydrolase 3 family.
     
 0.903
CC_1756
beta-D-glucosidase; Identified by match to protein family HMM.
     
 0.903
CC_2454
Lipase/acylhydrolase, putative; Identified by match to protein family HMM.
 
 
 0.770
CC_3042
Endo-1,4-beta-xylanase; Identified by match to protein family HMM.
 
   
 0.767
CC_2803
Glycosyl hydrolase, family 10; Identified by match to protein family HMM.
 
  
 0.762
CC_0543
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 
 
 0.615
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.