STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2264Identified by match to protein family HMM. (498 aa)    
Predicted Functional Partners:
CC_3637
UTP--glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM.
   
 0.969
CC_3618
Mannose-1-phosphate guanylyltransferase; Identified by match to protein family HMM; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.947
CC_0085
Phosphoglucomutase; Identified by match to protein family HMM.
  
 0.937
CC_1141
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.934
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.932
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
 
  
 0.931
pgi
Glucose-6-phosphate isomerase; Identified by match to protein family HMM.
  
 
 0.925
CC_3620
Identified by match to TIGR protein family HMM TIGR00232; Belongs to the transketolase family.
  
 0.925
glk
Glucokinase; Identified by match to TIGR protein family HMM TIGR00749; Belongs to the bacterial glucokinase family.
   
 
 0.915
CC_3167
Identified by match to protein family HMM; Belongs to the bacterial glucokinase family.
     
 0.915
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.