STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2301Hypothetical protein; Identified by Glimmer2; putative. (407 aa)    
Predicted Functional Partners:
CC_2302
Glutathione reductase; Maintains high levels of reduced glutathione.
  
    0.796
hfsE
HfsE; Identified by Glimmer2; putative.
  
  
 0.761
CC_0699
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.696
CC_1052
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM.
 
  
 0.690
CC_0075
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.689
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
       0.674
glmU
UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.
     
 0.662
CC_0209
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.581
flbE
flbE protein; Similar to GB:M98855 SP:Q04953 PID:144249; identified by sequence similarity; putative.
  
    0.565
CC_2300
Phospho-2-dehydro-3-deoxyheptonate aldolase, class II; Identified by match to PFAM protein family HMM PF01474.
       0.549
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.