Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CC_0431 | CC_2318 | CheX protein; Similar to GP:3282790; identified by sequence similarity; putative. | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | 0.776 |
| CC_0431 | CC_2319 | CheX protein; Similar to GP:3282790; identified by sequence similarity; putative. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.792 |
| CC_0431 | CC_2320 | CheX protein; Similar to GP:3282790; identified by sequence similarity; putative. | ABC transporter, periplasmic substrate-binding protein, putative; Similar to GP:6969065; identified by sequence similarity; putative. | 0.787 |
| CC_0431 | CC_3694 | CheX protein; Similar to GP:3282790; identified by sequence similarity; putative. | ABC transporter, substrate-binding protein, putative; Similar to GP:4336800; identified by sequence similarity; putative. | 0.791 |
| CC_0431 | CC_3695 | CheX protein; Similar to GP:3282790; identified by sequence similarity; putative. | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | 0.773 |
| CC_0431 | CC_3696 | CheX protein; Similar to GP:3282790; identified by sequence similarity; putative. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.786 |
| CC_1573 | CC_2320 | Chemotaxis MotB protein; Identified by match to protein family HMM. | ABC transporter, periplasmic substrate-binding protein, putative; Similar to GP:6969065; identified by sequence similarity; putative. | 0.573 |
| CC_1573 | CC_3694 | Chemotaxis MotB protein; Identified by match to protein family HMM. | ABC transporter, substrate-binding protein, putative; Similar to GP:4336800; identified by sequence similarity; putative. | 0.568 |
| CC_2317 | CC_2318 | Methyl-accepting chemotaxis protein McpM; Identified by match to protein family HMM. | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | 0.550 |
| CC_2317 | CC_2319 | Methyl-accepting chemotaxis protein McpM; Identified by match to protein family HMM. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.548 |
| CC_2317 | CC_2320 | Methyl-accepting chemotaxis protein McpM; Identified by match to protein family HMM. | ABC transporter, periplasmic substrate-binding protein, putative; Similar to GP:6969065; identified by sequence similarity; putative. | 0.585 |
| CC_2317 | CC_2321 | Methyl-accepting chemotaxis protein McpM; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.548 |
| CC_2318 | CC_0431 | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | CheX protein; Similar to GP:3282790; identified by sequence similarity; putative. | 0.776 |
| CC_2318 | CC_2317 | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | Methyl-accepting chemotaxis protein McpM; Identified by match to protein family HMM. | 0.550 |
| CC_2318 | CC_2319 | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.998 |
| CC_2318 | CC_2320 | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | ABC transporter, periplasmic substrate-binding protein, putative; Similar to GP:6969065; identified by sequence similarity; putative. | 0.997 |
| CC_2318 | CC_2321 | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.870 |
| CC_2318 | CC_3693 | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.865 |
| CC_2318 | CC_3694 | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | ABC transporter, substrate-binding protein, putative; Similar to GP:4336800; identified by sequence similarity; putative. | 0.984 |
| CC_2318 | CC_3695 | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | 0.919 |
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