STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2326Hypothetical protein; Identified by Glimmer2; putative. (259 aa)    
Predicted Functional Partners:
CC_2058
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.773
fliX
fliX protein; Required in an early step of flagellar assembly.
  
    0.755
cheL
Chemotactic signal-response protein CheL; Similar to GB:M91448 SP:P33980 PID:144242; identified by sequence similarity; putative.
 
  
 0.723
CC_2215
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.697
popZ
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.684
CC_1220
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.674
CC_2433
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.673
rcdA
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.669
CC_2059
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.666
fliE
Flagellar hook-basal body complex protein FliE; Identified by match to TIGR protein family HMM TIGR00205.
  
     0.655
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.