STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2329D-amino acid oxidase family protein; Identified by match to PFAM protein family HMM PF01266. (338 aa)    
Predicted Functional Partners:
thiG
thiG protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 
 0.973
CC_2328
Identified by match to PFAM protein family HMM PF00441.
  
 
 0.739
CC_3355
Glycine cleavage system T protein; Identified by match to TIGR protein family HMM TIGR00528.
  
 
 0.713
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.584
CC_3223
Phosphomethylpyrimidine kinase; Identified by match to TIGR protein family HMM TIGR00097.
 
  
 0.508
CC_2330
Transcriptional regulator, Cro/CI family; Identified by match to protein family HMM.
  
  
 0.489
CC_3607
Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645.
  
  
 0.453
CC_1903
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.413
CC_1881
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.400
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.