STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2345Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0262 family. (159 aa)    
Predicted Functional Partners:
CC_2344
Phosphotyrosine protein phosphatase; Identified by match to protein family HMM; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     0.959
CC_1021
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.816
CC_3401
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.790
CC_0189
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.781
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.740
CC_3115
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.729
atpF
ATP synthase F0, B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
   
 0.707
CC_3467
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.694
CC_1977
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.691
CC_2490
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.690
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.