STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2368Phosphotyrosine protein phosphatase; Identified by match to PFAM protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (167 aa)    
Predicted Functional Partners:
CC_2369
Hydantoinase/oxoprolinase; Identified by match to protein family HMM.
       0.777
CC_2934
3-deoxy-manno-octulosonate cytidylyltransferase; Identified by match to TIGR protein family HMM TIGR00466.
    
 0.644
CC_0164
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.609
CC_2370
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.505
CC_2536
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.463
CC_0110
Thioredoxin; Identified by match to protein family HMM.
  
 
 0.459
CC_3539
Thioredoxin; Identified by match to protein family HMM; Belongs to the thioredoxin family.
  
 
 0.459
CC_0885
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.447
engB
GTP-binding protein CgpA; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.439
CC_1163
Acyl carrier protein, putative; Identified by match to PFAM protein family HMM PF00550.
   
 
 0.434
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.