STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2389Cation efflux system protein, putative; Identified by match to protein family HMM. (420 aa)    
Predicted Functional Partners:
CC_2390
Identified by match to protein family HMM; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.968
CC_2388
Metal ion efflux outer membrane factor protein family; Similar to SP:P13509; identified by sequence similarity; putative.
 
 
 0.964
CC_2724
Metal ion efflux RND protein family; Identified by match to protein family HMM; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.861
CC_2721
Metal ion efflux outer membrane factor protein family; Identified by match to protein family HMM.
 
 0.841
CC_2090
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.752
CC_2387
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
CC_0179
General secretion pathway protein J; Similar to SP:P31589 PID:42192; identified by sequence similarity; putative.
  
    0.571
CC_1204
Identified by match to protein family HMM; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.507
CC_3120
Identified by match to protein family HMM; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.506
CC_2091
ABC transporter, ATP-binding protein; Identified by match to protein family HMM.
 
 
 0.497
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.