hfsG protein (Caulobacter vibrioides CB15) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

hfsG

Identified by match to protein family HMM. (309 aa)

Predicted Functional Partners:

hfsE

0.983

hfsF

0.978

hfsH

0.976

hfsC

0.928

hfsA

0.898

hfsI

0.895

hfaB

0.878

hfsD

0.867

CC_0948

0.748

CC_2277

0.693

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0948	CC_2277	CC_0948	CC_2277	Hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM.	0.587
CC_0948	hfaB	CC_0948	CC_2629	Hypothetical protein; Identified by Glimmer2; putative.	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	0.716
CC_0948	hfsA	CC_0948	CC_2431	Hypothetical protein; Identified by Glimmer2; putative.	HfsA; Identified by Glimmer2; putative.	0.768
CC_0948	hfsC	CC_0948	CC_2429	Hypothetical protein; Identified by Glimmer2; putative.	HfsC; Identified by Glimmer2; putative.	0.718
CC_0948	hfsD	CC_0948	CC_2432	Hypothetical protein; Identified by Glimmer2; putative.	HfsD; Identified by Glimmer2; putative.	0.431
CC_0948	hfsF	CC_0948	CC_2426	Hypothetical protein; Identified by Glimmer2; putative.	HfsF; Identified by match to protein family HMM.	0.754
CC_0948	hfsG	CC_0948	CC_2427	Hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM.	0.748
CC_0948	hfsH	CC_0948	CC_2428	Hypothetical protein; Identified by Glimmer2; putative.	HfsH; Identified by match to PFAM protein family HMM PF01522.	0.647
CC_0948	hfsI	CC_0948	CC_0499	Hypothetical protein; Identified by Glimmer2; putative.	HfsI; Identified by Glimmer2; putative.	0.665
CC_2277	CC_0948	CC_2277	CC_0948	Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.587
CC_2277	hfaB	CC_2277	CC_2629	Identified by match to protein family HMM.	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	0.504
CC_2277	hfsA	CC_2277	CC_2431	Identified by match to protein family HMM.	HfsA; Identified by Glimmer2; putative.	0.679
CC_2277	hfsC	CC_2277	CC_2429	Identified by match to protein family HMM.	HfsC; Identified by Glimmer2; putative.	0.778
CC_2277	hfsD	CC_2277	CC_2432	Identified by match to protein family HMM.	HfsD; Identified by Glimmer2; putative.	0.620
CC_2277	hfsE	CC_2277	CC_2425	Identified by match to protein family HMM.	HfsE; Identified by Glimmer2; putative.	0.706
CC_2277	hfsF	CC_2277	CC_2426	Identified by match to protein family HMM.	HfsF; Identified by match to protein family HMM.	0.719
CC_2277	hfsG	CC_2277	CC_2427	Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.693
CC_2277	hfsH	CC_2277	CC_2428	Identified by match to protein family HMM.	HfsH; Identified by match to PFAM protein family HMM PF01522.	0.911
CC_2277	hfsI	CC_2277	CC_0499	Identified by match to protein family HMM.	HfsI; Identified by Glimmer2; putative.	0.768
hfaB	CC_0948	CC_2629	CC_0948	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	Hypothetical protein; Identified by Glimmer2; putative.	0.716