Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0357 | CC_2495 | CC_0357 | CC_2495 | Fur family protein; Identified by match to protein family HMM; Belongs to the Fur family. | Rubredoxin; Identified by match to protein family HMM. | 0.480 |
| CC_0357 | CC_2918 | CC_0357 | CC_2918 | Fur family protein; Identified by match to protein family HMM; Belongs to the Fur family. | Alkyl hydroperoxide reductase, subunit c; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.564 |
| CC_0615 | CC_2495 | CC_0615 | CC_2495 | Nitrite reductase [NAD(P)H], large subunit; Identified by match to protein family HMM; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Rubredoxin; Identified by match to protein family HMM. | 0.868 |
| CC_2411 | CC_2495 | CC_2411 | CC_2495 | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM. | Rubredoxin; Identified by match to protein family HMM. | 0.512 |
| CC_2411 | CC_2918 | CC_2411 | CC_2918 | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM. | Alkyl hydroperoxide reductase, subunit c; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.628 |
| CC_2493 | CC_2494 | CC_2493 | CC_2494 | Transcriptional regulator, TetR family; Identified by match to protein family HMM. | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | 0.624 |
| CC_2493 | CC_2495 | CC_2493 | CC_2495 | Transcriptional regulator, TetR family; Identified by match to protein family HMM. | Rubredoxin; Identified by match to protein family HMM. | 0.560 |
| CC_2494 | CC_2493 | CC_2494 | CC_2493 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Transcriptional regulator, TetR family; Identified by match to protein family HMM. | 0.624 |
| CC_2494 | CC_2495 | CC_2494 | CC_2495 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Rubredoxin; Identified by match to protein family HMM. | 0.767 |
| CC_2494 | CC_2496 | CC_2494 | CC_2496 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.473 |
| CC_2494 | CC_3525 | CC_2494 | CC_3525 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Ferredoxin reductase; Identified by match to protein family HMM. | 0.585 |
| CC_2495 | CC_0357 | CC_2495 | CC_0357 | Rubredoxin; Identified by match to protein family HMM. | Fur family protein; Identified by match to protein family HMM; Belongs to the Fur family. | 0.480 |
| CC_2495 | CC_0615 | CC_2495 | CC_0615 | Rubredoxin; Identified by match to protein family HMM. | Nitrite reductase [NAD(P)H], large subunit; Identified by match to protein family HMM; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.868 |
| CC_2495 | CC_2411 | CC_2495 | CC_2411 | Rubredoxin; Identified by match to protein family HMM. | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM. | 0.512 |
| CC_2495 | CC_2493 | CC_2495 | CC_2493 | Rubredoxin; Identified by match to protein family HMM. | Transcriptional regulator, TetR family; Identified by match to protein family HMM. | 0.560 |
| CC_2495 | CC_2494 | CC_2495 | CC_2494 | Rubredoxin; Identified by match to protein family HMM. | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | 0.767 |
| CC_2495 | CC_2496 | CC_2495 | CC_2496 | Rubredoxin; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.426 |
| CC_2495 | CC_2918 | CC_2495 | CC_2918 | Rubredoxin; Identified by match to protein family HMM. | Alkyl hydroperoxide reductase, subunit c; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.564 |
| CC_2495 | CC_3525 | CC_2495 | CC_3525 | Rubredoxin; Identified by match to protein family HMM. | Ferredoxin reductase; Identified by match to protein family HMM. | 0.885 |
| CC_2495 | fur | CC_2495 | CC_0057 | Rubredoxin; Identified by match to protein family HMM. | Ferric uptake regulation protein; Identified by match to PFAM protein family HMM PF01475; Belongs to the Fur family. | 0.424 |
page 1 of 2