CC_2502 protein (Caulobacter vibrioides CB15)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CC_2502

Identified by match to protein family HMM. (309 aa)

Predicted Functional Partners:

CC_2501

0.705

CC_2198

0.575

CC_1144

0.548

CC_2503

0.545

CC_2504

0.524

CC_0799

0.491

CC_1398

0.491

CC_2506

0.487

CC_0889

0.441

CC_3298

0.431

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0799	CC_0889	Para-nitrobenzyl esterase; Identified by match to protein family HMM; Belongs to the type-B carboxylesterase/lipase family.	Leucine aminopeptidase-related protein; Identified by match to protein family HMM.	0.491
CC_0799	CC_2502	Para-nitrobenzyl esterase; Identified by match to protein family HMM; Belongs to the type-B carboxylesterase/lipase family.	Identified by match to protein family HMM.	0.491
CC_0889	CC_0799	Leucine aminopeptidase-related protein; Identified by match to protein family HMM.	Para-nitrobenzyl esterase; Identified by match to protein family HMM; Belongs to the type-B carboxylesterase/lipase family.	0.491
CC_0889	CC_1144	Leucine aminopeptidase-related protein; Identified by match to protein family HMM.	Aminopeptidase, putative; Identified by match to protein family HMM.	0.631
CC_0889	CC_1398	Leucine aminopeptidase-related protein; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.491
CC_0889	CC_2502	Leucine aminopeptidase-related protein; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.441
CC_0889	CC_2506	Leucine aminopeptidase-related protein; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.419
CC_1144	CC_0889	Aminopeptidase, putative; Identified by match to protein family HMM.	Leucine aminopeptidase-related protein; Identified by match to protein family HMM.	0.631
CC_1144	CC_2502	Aminopeptidase, putative; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.548
CC_1398	CC_0889	Hypothetical protein; Identified by Glimmer2; putative.	Leucine aminopeptidase-related protein; Identified by match to protein family HMM.	0.491
CC_1398	CC_2502	Hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM.	0.491
CC_2198	CC_2502	Identified by match to PFAM protein family HMM PF01433.	Identified by match to protein family HMM.	0.575
CC_2501	CC_2502	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.705
CC_2501	CC_2503	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.	Identified by match to PFAM protein family HMM PF01722; Belongs to the BolA/IbaG family.	0.501
CC_2501	CC_2504	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.492
CC_2501	CC_2506	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.427
CC_2502	CC_0799	Identified by match to protein family HMM.	Para-nitrobenzyl esterase; Identified by match to protein family HMM; Belongs to the type-B carboxylesterase/lipase family.	0.491
CC_2502	CC_0889	Identified by match to protein family HMM.	Leucine aminopeptidase-related protein; Identified by match to protein family HMM.	0.441
CC_2502	CC_1144	Identified by match to protein family HMM.	Aminopeptidase, putative; Identified by match to protein family HMM.	0.548
CC_2502	CC_1398	Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.491