STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2504Hypothetical protein; Identified by Glimmer2; putative. (296 aa)    
Predicted Functional Partners:
CC_2503
Identified by match to PFAM protein family HMM PF01722; Belongs to the BolA/IbaG family.
  
    0.745
CC_2505
Identified by match to protein family HMM; Belongs to the glutaredoxin family. Monothiol subfamily.
       0.619
CC_2506
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.590
CC_2502
Identified by match to protein family HMM.
       0.524
CC_2507
Hypothetical protein; Identified by Glimmer2; putative.
       0.497
CC_2501
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
  
    0.492
CC_3428
Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM.
  
 
 0.444
CC_1504
MIP family protein; Identified by match to PFAM protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.403
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.