STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2516Alcohol dehydrogenase, class III; Identified by match to protein family HMM; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa)    
Predicted Functional Partners:
CC_2515
Esterase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.998
CC_3580
Aldehyde dehydrogenase B; Identified by match to protein family HMM; Belongs to the aldehyde dehydrogenase family.
 
 0.918
CC_0419
Aldehyde dehydrogenase; Identified by match to protein family HMM.
 
 0.916
CC_3029
Alcohol dehydrogenase class III; Identified by match to protein family HMM.
  
 
 
0.916
CC_1216
Aldehyde dehydrogenase; Identified by match to protein family HMM; Belongs to the aldehyde dehydrogenase family.
  
 0.915
dhmA
Haloalkane dehalogenase, putative; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons.
   
  0.907
CC_2793
Amine oxidase, flavin-containing; Identified by match to PFAM protein family HMM PF01593.
     
  0.900
CC_2517
Transcriptional regulator, LysR family; Identified by match to protein family HMM; Belongs to the LysR transcriptional regulatory family.
  
  
 0.547
argG
Argininosuccinate synthase; Identified by match to TIGR protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
    
 0.468
relE2
Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Its toxic effect is neutralized by coexpression with cognate antitoxin RelB2 but no other ParD or RelB antitoxin.
       0.441
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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