STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2536Conserved hypothetical protein; Identified by Glimmer2; putative. (301 aa)    
Predicted Functional Partners:
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.965
CC_2538
Membrane protein, putative; Similar to GP:4007687; identified by sequence similarity; putative.
 
    0.721
CC_2627
Identified by match to protein family HMM.
   
 0.625
CC_2535
Transcriptional regulator, AsnC family; Identified by match to protein family HMM.
  
    0.611
CC_2477
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.597
CC_0995
TonB-dependent receptor, putative; Identified by Glimmer2; putative.
  
     0.571
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
  
 0.564
CC_2537
Hypothetical protein; Identified by Glimmer2; putative.
       0.556
CC_1079
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.552
CC_2028
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.548
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.