STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2567N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01510. (242 aa)    
Predicted Functional Partners:
CC_2568
Integral membrane protein; Identified by match to protein family HMM.
       0.786
CC_2566
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.773
CC_2377
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0145 family.
 
    0.665
CC_2006
Glycosyl hydrolase, family 3; Identified by match to protein family HMM.
 
   
 0.582
CC_2569
Monooxygenase, flavin-binding family; Identified by match to PFAM protein family HMM PF00743.
       0.495
dipM
Peptidase, M23/M37 family; Identified by match to protein family HMM.
     
 0.479
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
   
 0.477
CC_0137
ampG protein, putative; Identified by match to protein family HMM.
 
   
 0.462
murU
Nucleotidyltransferase family protein; Catalyzes the formation of UDP-N-acetylmuramate (UDP-MurNAc), a crucial precursor of the bacterial peptidoglycan cell wall, from UTP and MurNAc-alpha-1P. Is likely involved in peptidoglycan recycling as part of a cell wall recycling pathway that bypasses de novo biosynthesis of the peptidoglycan precursor UDP-MurNAc. Is able to complement the fosfomycin sensitivity phenotype of a P.putida mutant lacking murU.
  
     0.461
CC_2560
Identified by match to protein family HMM.
 
   
 0.452
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.