STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliXfliX protein; Required in an early step of flagellar assembly. (144 aa)    
Predicted Functional Partners:
flbD
Transcriptional regulator FlbD; Activation of sigma-54-dependent flagellar gene promoters and strong negative autoregulatory effects on its own promoter. The synthesis and function of FlbD in C.crescentus is controlled by an internal cell-cycle clock.
  
   
 0.915
cheL
Chemotactic signal-response protein CheL; Similar to GB:M91448 SP:P33980 PID:144242; identified by sequence similarity; putative.
 
     0.886
flbT
flbT protein; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK (25 kDa flagellin) mRNA and promotes its degradation.
 
   
 0.798
CC_2059
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.782
CC_2058
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.775
CC_2175
FliN family protein; Identified by match to PFAM protein family HMM PF01052.
  
  
 0.775
CC_2637
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.772
fliE
Flagellar hook-basal body complex protein FliE; Identified by match to TIGR protein family HMM TIGR00205.
  
     0.771
CC_2323
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.770
CC_1220
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.769
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.