Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0001 | CC_2626 | CC_0001 | CC_2626 | Conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation. | CBS domain protein; Identified by match to protein family HMM. | 0.627 |
| CC_2118 | CC_2626 | CC_2118 | CC_2626 | Conserved hypothetical protein; Identified by Glimmer2; putative. | CBS domain protein; Identified by match to protein family HMM. | 0.417 |
| CC_2626 | CC_0001 | CC_2626 | CC_0001 | CBS domain protein; Identified by match to protein family HMM. | Conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation. | 0.627 |
| CC_2626 | CC_2118 | CC_2626 | CC_2118 | CBS domain protein; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.417 |
| CC_2626 | CC_2627 | CC_2626 | CC_2627 | CBS domain protein; Identified by match to protein family HMM. | Identified by match to protein family HMM. | 0.709 |
| CC_2626 | CC_3607 | CC_2626 | CC_3607 | CBS domain protein; Identified by match to protein family HMM. | Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645. | 0.461 |
| CC_2626 | guaA | CC_2626 | CC_1620 | CBS domain protein; Identified by match to protein family HMM. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.481 |
| CC_2626 | hfaA | CC_2626 | CC_2628 | CBS domain protein; Identified by match to protein family HMM. | hfaA protein; Involved in attachment of the holdfast to the cell. The holdfast is a structure that allows the bacteria to firmly adheres to surfaces. | 0.467 |
| CC_2626 | hfaB | CC_2626 | CC_2629 | CBS domain protein; Identified by match to protein family HMM. | hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC. | 0.467 |
| CC_2627 | CC_2626 | CC_2627 | CC_2626 | Identified by match to protein family HMM. | CBS domain protein; Identified by match to protein family HMM. | 0.709 |
| CC_2627 | hfaA | CC_2627 | CC_2628 | Identified by match to protein family HMM. | hfaA protein; Involved in attachment of the holdfast to the cell. The holdfast is a structure that allows the bacteria to firmly adheres to surfaces. | 0.665 |
| CC_2627 | hfaB | CC_2627 | CC_2629 | Identified by match to protein family HMM. | hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC. | 0.652 |
| CC_3607 | CC_2626 | CC_3607 | CC_2626 | Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645. | CBS domain protein; Identified by match to protein family HMM. | 0.461 |
| CC_3607 | guaA | CC_3607 | CC_1620 | Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.608 |
| guaA | CC_2626 | CC_1620 | CC_2626 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | CBS domain protein; Identified by match to protein family HMM. | 0.481 |
| guaA | CC_3607 | CC_1620 | CC_3607 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645. | 0.608 |
| hfaA | CC_2626 | CC_2628 | CC_2626 | hfaA protein; Involved in attachment of the holdfast to the cell. The holdfast is a structure that allows the bacteria to firmly adheres to surfaces. | CBS domain protein; Identified by match to protein family HMM. | 0.467 |
| hfaA | CC_2627 | CC_2628 | CC_2627 | hfaA protein; Involved in attachment of the holdfast to the cell. The holdfast is a structure that allows the bacteria to firmly adheres to surfaces. | Identified by match to protein family HMM. | 0.665 |
| hfaA | hfaB | CC_2628 | CC_2629 | hfaA protein; Involved in attachment of the holdfast to the cell. The holdfast is a structure that allows the bacteria to firmly adheres to surfaces. | hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC. | 0.951 |
| hfaB | CC_2626 | CC_2629 | CC_2626 | hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC. | CBS domain protein; Identified by match to protein family HMM. | 0.467 |
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