STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hfaAhfaA protein; Involved in attachment of the holdfast to the cell. The holdfast is a structure that allows the bacteria to firmly adheres to surfaces. (147 aa)    
Predicted Functional Partners:
hfaB
hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.
  
  
 0.951
uup
ABC transporter, ATP-binding protein; Probably plays a role in ribosome assembly or function. May be involved in resolution of branched DNA intermediates that result from template switching in postreplication gaps. Binds DNA and has ATPase activity.
      
 0.738
hfsD
HfsD; Identified by Glimmer2; putative.
      
 0.733
hfsA
HfsA; Identified by Glimmer2; putative.
   
  
 0.732
hfsH
HfsH; Identified by match to PFAM protein family HMM PF01522.
      
 0.731
hfsB
HfsB; Identified by Glimmer2; putative.
      
 0.730
hfsF
HfsF; Identified by match to protein family HMM.
      
 0.695
hfsG
Identified by match to protein family HMM.
   
  
 0.683
CC_2627
Identified by match to protein family HMM.
     
 0.665
CC_2888
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.619
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.