CC_2633 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Experiments

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[Homology]

Score

CC_2633

Hypothetical protein; Identified by Glimmer2; putative. (334 aa)

Predicted Functional Partners:

CC_2635

0.972

CC_2634

0.942

CC_2636

0.588

CC_2637

0.588

CC_1832

0.576

cysC

0.563

CC_2632

0.547

CC_0610

0.513

CC_2638

0.513

CC_0611

0.502

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0610	CC_0611	CC_0610	CC_0611	Nitrate ABC transporter, permease protein; Identified by match to protein family HMM.	Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.997
CC_0610	CC_2633	CC_0610	CC_2633	Nitrate ABC transporter, permease protein; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.513
CC_0610	CC_2634	CC_0610	CC_2634	Nitrate ABC transporter, permease protein; Identified by match to protein family HMM.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.885
CC_0610	CC_2635	CC_0610	CC_2635	Nitrate ABC transporter, permease protein; Identified by match to protein family HMM.	ABC transporter, permease protein, putative; Identified by match to protein family HMM.	0.704
CC_0611	CC_0610	CC_0611	CC_0610	Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Nitrate ABC transporter, permease protein; Identified by match to protein family HMM.	0.997
CC_0611	CC_1832	CC_0611	CC_1832	Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC transporter, permease protein; Identified by match to protein family HMM.	0.793
CC_0611	CC_2633	CC_0611	CC_2633	Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.502
CC_0611	CC_2635	CC_0611	CC_2635	Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC transporter, permease protein, putative; Identified by match to protein family HMM.	0.799
CC_1832	CC_0611	CC_1832	CC_0611	ABC transporter, permease protein; Identified by match to protein family HMM.	Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.793
CC_1832	CC_2633	CC_1832	CC_2633	ABC transporter, permease protein; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.576
CC_1832	CC_2634	CC_1832	CC_2634	ABC transporter, permease protein; Identified by match to protein family HMM.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.696
CC_1832	CC_2635	CC_1832	CC_2635	ABC transporter, permease protein; Identified by match to protein family HMM.	ABC transporter, permease protein, putative; Identified by match to protein family HMM.	0.661
CC_2632	CC_2633	CC_2632	CC_2633	Sensor histidine kinase/response regulator; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.547
CC_2632	CC_2634	CC_2632	CC_2634	Sensor histidine kinase/response regulator; Identified by match to protein family HMM.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.535
CC_2632	CC_2635	CC_2632	CC_2635	Sensor histidine kinase/response regulator; Identified by match to protein family HMM.	ABC transporter, permease protein, putative; Identified by match to protein family HMM.	0.535
CC_2632	CC_2636	CC_2632	CC_2636	Sensor histidine kinase/response regulator; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.429
CC_2632	CC_2637	CC_2632	CC_2637	Sensor histidine kinase/response regulator; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.425
CC_2633	CC_0610	CC_2633	CC_0610	Hypothetical protein; Identified by Glimmer2; putative.	Nitrate ABC transporter, permease protein; Identified by match to protein family HMM.	0.513
CC_2633	CC_0611	CC_2633	CC_0611	Hypothetical protein; Identified by Glimmer2; putative.	Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.502
CC_2633	CC_1832	CC_2633	CC_1832	Hypothetical protein; Identified by Glimmer2; putative.	ABC transporter, permease protein; Identified by match to protein family HMM.	0.576