STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2634ABC transporter, ATP-binding protein; Identified by match to protein family HMM. (249 aa)    
Predicted Functional Partners:
CC_2635
ABC transporter, permease protein, putative; Identified by match to protein family HMM.
  
 0.987
CC_2633
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.942
CC_0609
Nitrate ABC transporter, periplasmic nitrate-binding protein; Similar to PID:1652571; identified by sequence similarity; putative.
  
 0.899
CC_0610
Nitrate ABC transporter, permease protein; Identified by match to protein family HMM.
  
 0.885
CC_1596
Sulphate ABC transporter, permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    0.799
CC_1832
ABC transporter, permease protein; Identified by match to protein family HMM.
  
 0.696
ccmA
Heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
  
     0.658
CC_1597
Sulfate ABC transporter, permease protein; Identified by match to protein family HMM.
 
 
    0.629
CC_2636
Hypothetical protein; Identified by Glimmer2; putative.
       0.588
CC_2637
Hypothetical protein; Identified by Glimmer2; putative.
       0.588
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.