Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CC_0609 | CC_0610 | Nitrate ABC transporter, periplasmic nitrate-binding protein; Similar to PID:1652571; identified by sequence similarity; putative. | Nitrate ABC transporter, permease protein; Identified by match to protein family HMM. | 0.998 |
| CC_0609 | CC_0611 | Nitrate ABC transporter, periplasmic nitrate-binding protein; Similar to PID:1652571; identified by sequence similarity; putative. | Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.999 |
| CC_0609 | CC_1831 | Nitrate ABC transporter, periplasmic nitrate-binding protein; Similar to PID:1652571; identified by sequence similarity; putative. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.865 |
| CC_0609 | CC_1832 | Nitrate ABC transporter, periplasmic nitrate-binding protein; Similar to PID:1652571; identified by sequence similarity; putative. | ABC transporter, permease protein; Identified by match to protein family HMM. | 0.717 |
| CC_0609 | CC_2634 | Nitrate ABC transporter, periplasmic nitrate-binding protein; Similar to PID:1652571; identified by sequence similarity; putative. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.899 |
| CC_0609 | CC_2635 | Nitrate ABC transporter, periplasmic nitrate-binding protein; Similar to PID:1652571; identified by sequence similarity; putative. | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | 0.597 |
| CC_0610 | CC_0609 | Nitrate ABC transporter, permease protein; Identified by match to protein family HMM. | Nitrate ABC transporter, periplasmic nitrate-binding protein; Similar to PID:1652571; identified by sequence similarity; putative. | 0.998 |
| CC_0610 | CC_0611 | Nitrate ABC transporter, permease protein; Identified by match to protein family HMM. | Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.997 |
| CC_0610 | CC_1831 | Nitrate ABC transporter, permease protein; Identified by match to protein family HMM. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.731 |
| CC_0610 | CC_1833 | Nitrate ABC transporter, permease protein; Identified by match to protein family HMM. | ABC transporter, periplasmic substrate-binding protein; Similar to PID:1652373; identified by sequence similarity; putative. | 0.622 |
| CC_0610 | CC_2633 | Nitrate ABC transporter, permease protein; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.513 |
| CC_0610 | CC_2634 | Nitrate ABC transporter, permease protein; Identified by match to protein family HMM. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.885 |
| CC_0610 | CC_2635 | Nitrate ABC transporter, permease protein; Identified by match to protein family HMM. | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | 0.704 |
| CC_0611 | CC_0609 | Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | Nitrate ABC transporter, periplasmic nitrate-binding protein; Similar to PID:1652571; identified by sequence similarity; putative. | 0.999 |
| CC_0611 | CC_0610 | Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | Nitrate ABC transporter, permease protein; Identified by match to protein family HMM. | 0.997 |
| CC_0611 | CC_1832 | Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | ABC transporter, permease protein; Identified by match to protein family HMM. | 0.793 |
| CC_0611 | CC_1833 | Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | ABC transporter, periplasmic substrate-binding protein; Similar to PID:1652373; identified by sequence similarity; putative. | 0.588 |
| CC_0611 | CC_2633 | Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.502 |
| CC_0611 | CC_2635 | Nitrate ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | ABC transporter, permease protein, putative; Identified by match to protein family HMM. | 0.799 |
| CC_1831 | CC_0609 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | Nitrate ABC transporter, periplasmic nitrate-binding protein; Similar to PID:1652571; identified by sequence similarity; putative. | 0.865 |
page 1 of 4