STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (332 aa)    
Predicted Functional Partners:
CC_2664
TonB-dependent receptor, putative; Identified by match to protein family HMM; Belongs to the nlpA lipoprotein family.
 0.999
CC_2668
ABC transporter, permease protein; Identified by match to protein family HMM.
 0.999
CC_1440
Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM.
 
   
 0.921
CC_0761
ABC transporter, ATP-binding protein CydD; Identified by match to protein family HMM.
   
0.908
CC_0329
Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.699
CC_2140
5,10-methylenetetrahydrofolate reductase; Identified by match to TIGR protein family HMM TIGR00676; Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.680
CC_2667
Hypothetical protein; Identified by Glimmer2; putative.
       0.634
CC_2670
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
  
  
 0.573
CC_0050
S-adenosylmethionine synthetase; Identified by match to protein family HMM; Belongs to the AdoMet synthase family.
  
  
 0.551
CC_1597
Sulfate ABC transporter, permease protein; Identified by match to protein family HMM.
    
 0.531
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.