STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2674Conserved hypothetical protein; Identified by Glimmer2; putative. (252 aa)    
Predicted Functional Partners:
CC_1737
Competence/damage-inducible protein CinA; Identified by match to protein family HMM; Belongs to the CinA family.
    
 0.918
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
      0.649
sfsA
Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family.
       0.567
nadE
NAD(+) synthetase, putative; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.499
CC_1159
Hypothetical protein; Identified by Glimmer2; putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.494
CC_2908
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to TIGR protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.494
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.432
CC_2676
Hypothetical protein; Identified by Glimmer2; putative.
       0.414
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.