Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_2371 | CC_2681 | CC_2371 | CC_2681 | Hypothetical protein; Identified by Glimmer2; putative. | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | 0.408 |
| CC_2421 | CC_2681 | CC_2421 | CC_2681 | Type IV secretion system protein B9, putative; Similar to GP:6249470; identified by sequence similarity; putative. | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | 0.419 |
| CC_2421 | CC_2685 | CC_2421 | CC_2685 | Type IV secretion system protein B9, putative; Similar to GP:6249470; identified by sequence similarity; putative. | Conjugal transfer protein TrbI; Identified by match to PFAM protein family HMM PF00465. | 0.974 |
| CC_2421 | CC_2687 | CC_2421 | CC_2687 | Type IV secretion system protein B9, putative; Similar to GP:6249470; identified by sequence similarity; putative. | Conjugal transfer protein TrbF; Identified by match to protein family HMM. | 0.800 |
| CC_2681 | CC_2371 | CC_2681 | CC_2371 | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.408 |
| CC_2681 | CC_2421 | CC_2681 | CC_2421 | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | Type IV secretion system protein B9, putative; Similar to GP:6249470; identified by sequence similarity; putative. | 0.419 |
| CC_2681 | CC_2685 | CC_2681 | CC_2685 | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | Conjugal transfer protein TrbI; Identified by match to PFAM protein family HMM PF00465. | 0.423 |
| CC_2681 | CC_2686 | CC_2681 | CC_2686 | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | Conjugal transfer protein TrbG; Identified by match to protein family HMM. | 0.420 |
| CC_2681 | CC_2687 | CC_2681 | CC_2687 | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | Conjugal transfer protein TrbF; Identified by match to protein family HMM. | 0.464 |
| CC_2681 | guaA | CC_2681 | CC_1620 | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.422 |
| CC_2685 | CC_2421 | CC_2685 | CC_2421 | Conjugal transfer protein TrbI; Identified by match to PFAM protein family HMM PF00465. | Type IV secretion system protein B9, putative; Similar to GP:6249470; identified by sequence similarity; putative. | 0.974 |
| CC_2685 | CC_2681 | CC_2685 | CC_2681 | Conjugal transfer protein TrbI; Identified by match to PFAM protein family HMM PF00465. | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | 0.423 |
| CC_2685 | CC_2686 | CC_2685 | CC_2686 | Conjugal transfer protein TrbI; Identified by match to PFAM protein family HMM PF00465. | Conjugal transfer protein TrbG; Identified by match to protein family HMM. | 0.999 |
| CC_2685 | CC_2687 | CC_2685 | CC_2687 | Conjugal transfer protein TrbI; Identified by match to PFAM protein family HMM PF00465. | Conjugal transfer protein TrbF; Identified by match to protein family HMM. | 0.995 |
| CC_2686 | CC_2681 | CC_2686 | CC_2681 | Conjugal transfer protein TrbG; Identified by match to protein family HMM. | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | 0.420 |
| CC_2686 | CC_2685 | CC_2686 | CC_2685 | Conjugal transfer protein TrbG; Identified by match to protein family HMM. | Conjugal transfer protein TrbI; Identified by match to PFAM protein family HMM PF00465. | 0.999 |
| CC_2686 | CC_2687 | CC_2686 | CC_2687 | Conjugal transfer protein TrbG; Identified by match to protein family HMM. | Conjugal transfer protein TrbF; Identified by match to protein family HMM. | 0.995 |
| CC_2687 | CC_2421 | CC_2687 | CC_2421 | Conjugal transfer protein TrbF; Identified by match to protein family HMM. | Type IV secretion system protein B9, putative; Similar to GP:6249470; identified by sequence similarity; putative. | 0.800 |
| CC_2687 | CC_2681 | CC_2687 | CC_2681 | Conjugal transfer protein TrbF; Identified by match to protein family HMM. | Integrase/recombinase, phage integrase family; Identified by match to protein family HMM; Belongs to the 'phage' integrase family. | 0.464 |
| CC_2687 | CC_2685 | CC_2687 | CC_2685 | Conjugal transfer protein TrbF; Identified by match to protein family HMM. | Conjugal transfer protein TrbI; Identified by match to PFAM protein family HMM PF00465. | 0.995 |
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