STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2762Cytochrome c-type biogenesis protein CycH; Similar to PID:1353873; identified by sequence similarity; putative. (370 aa)    
Predicted Functional Partners:
ccmE
Cytochrome c-type biogenesis protein CycJ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
 
  
 0.898
CC_2760
Cytochrome c-type biogenesis protein CycK; Identified by match to TIGR protein family HMM TIGR00353.
 
 
 0.889
CC_2759
Cytochrome c-type biogenesis protein CycL; Possible subunit of a heme lyase.
 
  
 0.844
CC_3674
Thiol:disulfide interchange protein CycY; Identified by match to protein family HMM.
  
  
 0.717
CC_2763
Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM.
 
     0.635
CC_0345
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.612
CC_2490
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.542
CC_3537
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.502
CC_3669
Heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
 
   
 0.484
CC_0043
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.461
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.