STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2765Sensor histidine kinase; Identified by match to protein family HMM. (465 aa)    
Predicted Functional Partners:
CC_2766
DNA-binding response regulator; Identified by match to protein family HMM.
 
 0.986
CC_1304
DNA-binding response regulator; Identified by match to protein family HMM.
 
 
 0.834
CC_3325
DNA-binding response regulator; Identified by match to protein family HMM.
 
 
 0.784
CC_0294
Phosphate regulon response regulator PhoB; Identified by match to protein family HMM.
 
 
 0.781
CC_1182
DNA-binding response regulator; Identified by match to protein family HMM.
 
 
 0.769
ctrA
Cell cycle transcriptional regulator CtrA; Forms part of a two-component regulatory system CtrA/CckA that controls multiple events in the cell cycle, including cell division, stalk synthesis and cell cycle-specific transcription. Binds to a group of cell cycle-regulated promoters critical for DNA replication, DNA methylation, and class II flagellar biogenesis.
 
 
 0.704
CC_1740
Nitrogen regulation protein NR(II); Identified by match to protein family HMM.
  
 
 0.699
CC_0289
Phosphate regulon sensor histidine kinase PhoR; Identified by match to protein family HMM.
  
   
 0.660
CC_2757
DNA-binding response regulator; Identified by match to protein family HMM.
 
 
 0.617
CC_1293
DNA-binding response regulator; Identified by match to protein family HMM.
 
 
 0.608
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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