STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2785Bleomycin resistance protein; Identified by match to PFAM protein family HMM PF02105. (120 aa)    
Predicted Functional Partners:
CC_2784
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
CC_1761
IS30 family, transposase; Identified by match to protein family HMM.
      
 0.759
CC_3224
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
   
  
 0.735
CC_3561
Aminoglycoside acetyltransferase (6') type I; Catalyzes the transfer of an acetyl group from acetyl-CoA to the 6'-amino group of aminoglycoside molecules conferring resistance to antibiotics containing the purpurosamine ring.
      
 0.627
CC_2565
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.583
CC_0139
TonB-dependent receptor; Identified by match to protein family HMM.
  
     0.581
CC_0498
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.547
CC_3179
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.508
CC_3194
TonB-dependent receptor; Similar to GP:9105165; identified by sequence similarity; putative.
  
    0.507
CC_2420
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.495
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.