CC_2818 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Experiments

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[Homology]

Score

CC_2818

TPR domain protein; Identified by match to protein family HMM. (526 aa)

Predicted Functional Partners:

CC_3128

0.742

CC_2817

0.572

CC_0387

0.493

CC_2819

0.490

CC_3127

0.448

CC_2885

0.445

CC_0746

0.423

CC_3584

0.404

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0387	CC_2818	Hypothetical protein; Identified by Glimmer2; putative.	TPR domain protein; Identified by match to protein family HMM.	0.493
CC_0746	CC_2818	Alkaline metalloproteinase, putative; Identified by match to PFAM protein family HMM PF00353.	TPR domain protein; Identified by match to protein family HMM.	0.423
CC_2817	CC_2818	Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702.	TPR domain protein; Identified by match to protein family HMM.	0.572
CC_2818	CC_0387	TPR domain protein; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.493
CC_2818	CC_0746	TPR domain protein; Identified by match to protein family HMM.	Alkaline metalloproteinase, putative; Identified by match to PFAM protein family HMM PF00353.	0.423
CC_2818	CC_2817	TPR domain protein; Identified by match to protein family HMM.	Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702.	0.572
CC_2818	CC_2819	TPR domain protein; Identified by match to protein family HMM.	TonB-dependent receptor, putative; Identified by match to protein family HMM.	0.490
CC_2818	CC_2885	TPR domain protein; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.445
CC_2818	CC_3127	TPR domain protein; Identified by match to protein family HMM.	TonB-dependent receptor; Identified by match to protein family HMM.	0.448
CC_2818	CC_3128	TPR domain protein; Identified by match to protein family HMM.	TPR domain protein; Identified by match to protein family HMM.	0.742
CC_2818	CC_3584	TPR domain protein; Identified by match to protein family HMM.	Peptidase, M16 family; Identified by match to PFAM protein family HMM PF00675.	0.404
CC_2819	CC_2818	TonB-dependent receptor, putative; Identified by match to protein family HMM.	TPR domain protein; Identified by match to protein family HMM.	0.490
CC_2819	CC_3127	TonB-dependent receptor, putative; Identified by match to protein family HMM.	TonB-dependent receptor; Identified by match to protein family HMM.	0.595
CC_2885	CC_2818	Hypothetical protein; Identified by Glimmer2; putative.	TPR domain protein; Identified by match to protein family HMM.	0.445
CC_3127	CC_2818	TonB-dependent receptor; Identified by match to protein family HMM.	TPR domain protein; Identified by match to protein family HMM.	0.448
CC_3127	CC_2819	TonB-dependent receptor; Identified by match to protein family HMM.	TonB-dependent receptor, putative; Identified by match to protein family HMM.	0.595
CC_3127	CC_3128	TonB-dependent receptor; Identified by match to protein family HMM.	TPR domain protein; Identified by match to protein family HMM.	0.878
CC_3128	CC_2818	TPR domain protein; Identified by match to protein family HMM.	TPR domain protein; Identified by match to protein family HMM.	0.742
CC_3128	CC_3127	TPR domain protein; Identified by match to protein family HMM.	TonB-dependent receptor; Identified by match to protein family HMM.	0.878
CC_3584	CC_2818	Peptidase, M16 family; Identified by match to PFAM protein family HMM PF00675.	TPR domain protein; Identified by match to protein family HMM.	0.404