CC_2830 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Experiments

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[Homology]

Score

CC_2830

Hypothetical protein; Identified by Glimmer2; putative. (615 aa)

Predicted Functional Partners:

CC_2829

0.951

CC_2827

0.948

CC_2825

0.933

CC_2824

0.931

CC_2823

0.911

CC_2826

0.825

CC_2828

0.795

CC_2123

0.746

CC_0446

0.697

CC_1001

0.454

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0446	CC_1001	TonB-dependent receptor; Identified by match to protein family HMM.	Pass1-related protein; Similar to GP:5731277; identified by sequence similarity; putative.	0.758
CC_0446	CC_2123	TonB-dependent receptor; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.539
CC_0446	CC_2827	TonB-dependent receptor; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.434
CC_0446	CC_2829	TonB-dependent receptor; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.571
CC_0446	CC_2830	TonB-dependent receptor; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.697
CC_1001	CC_0446	Pass1-related protein; Similar to GP:5731277; identified by sequence similarity; putative.	TonB-dependent receptor; Identified by match to protein family HMM.	0.758
CC_1001	CC_2830	Pass1-related protein; Similar to GP:5731277; identified by sequence similarity; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.454
CC_2123	CC_0446	Conserved hypothetical protein; Identified by Glimmer2; putative.	TonB-dependent receptor; Identified by match to protein family HMM.	0.539
CC_2123	CC_2829	Conserved hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.636
CC_2123	CC_2830	Conserved hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.746
CC_2823	CC_2824	Identified by match to PFAM protein family HMM PF01523.	Identified by match to PFAM protein family HMM PF01523.	0.937
CC_2823	CC_2825	Identified by match to PFAM protein family HMM PF01523.	Hypothetical protein; Identified by Glimmer2; putative.	0.931
CC_2823	CC_2826	Identified by match to PFAM protein family HMM PF01523.	moxR protein; Identified by match to PFAM protein family HMM PF01078.	0.689
CC_2823	CC_2827	Identified by match to PFAM protein family HMM PF01523.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.872
CC_2823	CC_2828	Identified by match to PFAM protein family HMM PF01523.	Hypothetical protein; Identified by Glimmer2; putative.	0.647
CC_2823	CC_2829	Identified by match to PFAM protein family HMM PF01523.	Hypothetical protein; Identified by Glimmer2; putative.	0.914
CC_2823	CC_2830	Identified by match to PFAM protein family HMM PF01523.	Hypothetical protein; Identified by Glimmer2; putative.	0.911
CC_2824	CC_2823	Identified by match to PFAM protein family HMM PF01523.	Identified by match to PFAM protein family HMM PF01523.	0.937
CC_2824	CC_2825	Identified by match to PFAM protein family HMM PF01523.	Hypothetical protein; Identified by Glimmer2; putative.	0.948
CC_2824	CC_2826	Identified by match to PFAM protein family HMM PF01523.	moxR protein; Identified by match to PFAM protein family HMM PF01078.	0.735