STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2839Hypothetical protein; Identified by Glimmer2; putative. (81 aa)    
Predicted Functional Partners:
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction.
  
 
 0.991
FlgB
Flagellar basal-body rod protein FlgB, putative; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
 
 0.991
FlgC
Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
  
 
 0.991
fliQ
Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis; Belongs to the FliQ/MopD/SpaQ family.
  
 
 0.991
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.991
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.991
CC_0901
Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein.
  
 
 0.986
CC_0899
Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
  
  
 0.979
cheL
Chemotactic signal-response protein CheL; Similar to GB:M91448 SP:P33980 PID:144242; identified by sequence similarity; putative.
  
  
 0.979
CC_2059
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.973
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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