STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2854Flagellin modification protein FlmD; Similar to PID:903375; identified by sequence similarity; putative. (329 aa)    
Predicted Functional Partners:
CC_2853
Flagellin modification protein FlmC; Identified by match to protein family HMM.
  
 0.984
CC_1456
Flagellin modification protein FlmH; Identified by match to protein family HMM.
  
 0.915
CC_2868
neuB protein, putative; Similar to GB:U05248 PID:454081; identified by sequence similarity; putative.
 
  
 0.914
CC_3575
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 0.878
CC_0233
Flagellin modification protein FlmA; Identified by match to protein family HMM.
 
   
 0.809
CC_0234
Flagellin modification protein FlmB; Identified by match to PFAM protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.803
CC_2855
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
CC_3576
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.509
CC_1141
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
    0.503
CC_2852
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
       0.496
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.