STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2885Hypothetical protein; Identified by Glimmer2; putative. (394 aa)    
Predicted Functional Partners:
CC_0462
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.919
kynA
Conserved hypothetical protein; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
 
    0.843
CC_1061
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.743
CC_1862
ABC transporter, ATP-binding protein; Identified by match to protein family HMM.
  
  
 0.741
CC_1864
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.710
CC_0523
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
   0.705
CC_1861
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.705
CC_0862
Conserved hypothetical protein; Identified by Glimmer2; putative.
    
   0.654
CC_2887
Transcriptional regulator, AsnC family; Identified by match to protein family HMM.
  
    0.570
CC_0864
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.513
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.