STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2908CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to TIGR protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (205 aa)    
Predicted Functional Partners:
CC_1918
Phosphatidate cytidylyltransferase; Identified by match to PFAM protein family HMM PF01148; Belongs to the CDS family.
 
  
 0.953
CC_1924
Conserved hypothetical protein; Identified by Glimmer2; putative.
    
 0.906
gpsA
Glycerol-3-phosphate dehydrogenase (NAD+); Identified by match to PFAM protein family HMM PF01210; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   
 0.810
CC_2906
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0276 family.
   
  
 0.733
CC_2905
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.732
CC_2907
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.732
rodZ
RodZ.
  
    0.707
folD
FolD bifunctional protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
 0.522
CC_2910
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.519
CC_2909
Sensor histidine kinase, putative; Identified by match to protein family HMM.
       0.517
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.