STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2910Conserved hypothetical protein; Identified by Glimmer2; putative. (300 aa)    
Predicted Functional Partners:
CC_3722
D-isomer specific 2-hydroxyacid dehydrogenases family protein; Identified by match to PFAM protein family HMM PF00389; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.913
CC_3215
D-3-phosphoglycerate dehydrogenase; Identified by match to PFAM protein family HMM PF00389; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.907
CC_0419
Aldehyde dehydrogenase; Identified by match to protein family HMM.
     
  0.900
CC_1216
Aldehyde dehydrogenase; Identified by match to protein family HMM; Belongs to the aldehyde dehydrogenase family.
     
  0.900
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
     
  0.900
CC_2909
Sensor histidine kinase, putative; Identified by match to protein family HMM.
  
    0.774
CC_2911
Hypothetical protein; Identified by Glimmer2; putative.
       0.757
CC_0727
Electron transfer flavoprotein, beta subunit; Identified by match to PFAM protein family HMM PF01012.
 
      0.576
CC_2908
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to TIGR protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.519
CC_0571
TonB-dependent receptor; Identified by match to protein family HMM.
  
     0.504
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.