STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nadAQuinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (377 aa)    
Predicted Functional Partners:
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 0.999
CC_2915
Nicotinate-nucleotide pyrophosphorylase; Identified by match to TIGR protein family HMM TIGR00078; Belongs to the NadC/ModD family.
 
 0.999
CC_1450
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.887
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
      
 0.772
CC_2651
Serine acetyltransferase; Identified by match to protein family HMM.
  
    0.763
rpsQ
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
      
 0.732
CC_0992
Transcriptional regulator, TetR family; Identified by match to protein family HMM.
   
  
 0.727
CC_0495
Transcriptional regulator, TetR family, putative; Identified by match to protein family HMM.
      
 0.722
CC_1345
Transcriptional regulator, TetR family; Identified by match to protein family HMM.
      
 0.722
CC_1786
Transcriptional regulator, TetR family; Identified by match to protein family HMM.
      
 0.722
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.