STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2918Alkyl hydroperoxide reductase, subunit c; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)    
Predicted Functional Partners:
CC_2919
Alkyl hydroperoxide reductase, subunit f; Identified by match to protein family HMM.
 
  
 0.997
CC_2871
Thioredoxin reductase; Identified by match to protein family HMM.
  
 
 0.938
CC_3394
AhpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.928
CC_2210
Thiol:disulfide interchange protein, putative; Identified by match to protein family HMM.
  
 0.921
CC_3674
Thiol:disulfide interchange protein CycY; Identified by match to protein family HMM.
  
 0.918
fur
Ferric uptake regulation protein; Identified by match to PFAM protein family HMM PF01475; Belongs to the Fur family.
  
  
 0.749
CC_2873
Dps family protein; Identified by match to PFAM protein family HMM PF02047; Belongs to the Dps family.
  
  
 0.736
CC_1792
ROK family protein; Identified by match to protein family HMM.
  
  
 0.687
CC_2411
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM.
  
  
 0.628
groL
Chaperonin, 60 kDa; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 0.602
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.