STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2933Prephenate dehydratase; Identified by match to PFAM protein family HMM PF00800. (283 aa)    
Predicted Functional Partners:
CC_1534
Aspartate aminotransferase; Identified by match to protein family HMM.
 
 0.991
CC_2934
3-deoxy-manno-octulosonate cytidylyltransferase; Identified by match to TIGR protein family HMM TIGR00466.
 
    0.978
CC_2224
Cyclohexadienyl dehydrogenase; Identified by match to PFAM protein family HMM PF02153.
 
 
 0.958
hisC1
Histidinol-phosphate aminotransferase; Identified by match to protein family HMM; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.916
CC_1071
Histidinol-phosphate aminotransferase, putative; Identified by match to protein family HMM.
  
 
 0.915
hisC2
Histidinol-phosphate aminotransferase; Identified by match to protein family HMM; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.915
phhA
Phenylalanine-4-hydroxylase; Identified by match to protein family HMM.
     
 0.907
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; Similar to SP:Q46225 PID:1359596; identified by sequence similarity; putative; Belongs to the KdsA family.
 
 
  
 0.897
katG
Catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity (By similarity). Important for stationary phase survival; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
  0.800
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
 
   
 0.648
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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