STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2974Hypothetical protein; Identified by Glimmer2; putative. (123 aa)    
Predicted Functional Partners:
CC_2975
4-oxalocrotonate tautomerase; Identified by match to TIGR protein family HMM TIGR00013; Belongs to the 4-oxalocrotonate tautomerase family.
 
     0.949
CC_2973
Glutathione S-transferase; Identified by match to protein family HMM.
 
   0.908
CC_2972
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.688
sodC
Superoxide dismutase, Cu-Zn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity). May function against extracytoplasmic toxic oxygen species; Belongs to the Cu-Zn superoxide dismutase family.
  
 
 0.544
CC_3347
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.535
CC_2058
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.531
CC_2971
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
  
    0.486
SdhB
Succinate dehydrogenase, iron-sulfur protein; Identified by match to protein family HMM; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
 0.486
CC_2976
Flagellin, putative; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
    0.438
CC_1639
Identified by match to protein family HMM.
   
 0.432
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.