STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3021Cobalamin biosynthesis protein; Similar to GB:M62869 SP:P29933 PID:151168 PID:1926457; identified by sequence similarity; putative. (336 aa)    
Predicted Functional Partners:
CC_0672
Cobalamin biosynthesis protein; Identified by sequence similarity; putative.
 
 
 0.982
CC_0729
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the Cob(I)alamin adenosyltransferase family.
     
  0.900
atpF
ATP synthase F0, B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.694
CC_3010
Identified by match to protein family HMM.
 
     0.685
CC_3020
Hypothetical protein; Identified by Glimmer2; putative.
       0.664
atpF-2
ATP synthase F0, B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.512
CC_3019
PAP2 superfamily protein; Identified by match to PFAM protein family HMM PF01569.
       0.507
CC_1211
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.505
CC_3537
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.499
CC_3022
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.476
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.