Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
CC_3029Alcohol dehydrogenase class III; Identified by match to protein family HMM. (366 aa)    
Predicted Functional Partners:
CC_2515
Esterase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.996
CC_2516
Alcohol dehydrogenase, class III; Identified by match to protein family HMM; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
 
0.916
CC_3580
Aldehyde dehydrogenase B; Identified by match to protein family HMM; Belongs to the aldehyde dehydrogenase family.
  
 0.915
CC_0419
Aldehyde dehydrogenase; Identified by match to protein family HMM.
  
 0.914
dhmA
Haloalkane dehalogenase, putative; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons.
    
  0.905
CC_2793
Amine oxidase, flavin-containing; Identified by match to PFAM protein family HMM PF01593.
     
  0.900
CC_3030
Identified by match to protein family HMM.
  
    0.781
CC_3031
Phospholipase C; Similar to GB:M30223 SP:P15713 GB:M59304 PID:151496 PID:151498; identified by sequence similarity; putative.
  
  
 0.583
CC_3026
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
CC_3027
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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