Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CC_0336 | CC_1285 | Major facilitator family transporter; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.440 |
| CC_0336 | CC_3127 | Major facilitator family transporter; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.496 |
| CC_0336 | CC_3128 | Major facilitator family transporter; Identified by match to protein family HMM. | TPR domain protein; Identified by match to protein family HMM. | 0.424 |
| CC_0336 | CC_3461 | Major facilitator family transporter; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.660 |
| CC_0999 | CC_1026 | TonB-dependent receptor, putative; Similar to GP:9187833; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.409 |
| CC_0999 | CC_3127 | TonB-dependent receptor, putative; Similar to GP:9187833; identified by sequence similarity; putative. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.589 |
| CC_0999 | CC_3128 | TonB-dependent receptor, putative; Similar to GP:9187833; identified by sequence similarity; putative. | TPR domain protein; Identified by match to protein family HMM. | 0.506 |
| CC_0999 | CC_3461 | TonB-dependent receptor, putative; Similar to GP:9187833; identified by sequence similarity; putative. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.410 |
| CC_1026 | CC_0999 | Hypothetical protein; Identified by Glimmer2; putative. | TonB-dependent receptor, putative; Similar to GP:9187833; identified by sequence similarity; putative. | 0.409 |
| CC_1026 | CC_3127 | Hypothetical protein; Identified by Glimmer2; putative. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.401 |
| CC_1026 | CC_3128 | Hypothetical protein; Identified by Glimmer2; putative. | TPR domain protein; Identified by match to protein family HMM. | 0.415 |
| CC_1285 | CC_0336 | Hypothetical protein; Identified by Glimmer2; putative. | Major facilitator family transporter; Identified by match to protein family HMM. | 0.440 |
| CC_1285 | CC_3128 | Hypothetical protein; Identified by Glimmer2; putative. | TPR domain protein; Identified by match to protein family HMM. | 0.439 |
| CC_2818 | CC_3127 | TPR domain protein; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.448 |
| CC_2818 | CC_3128 | TPR domain protein; Identified by match to protein family HMM. | TPR domain protein; Identified by match to protein family HMM. | 0.742 |
| CC_3126 | CC_3127 | Amino acid permease; Identified by match to PFAM protein family HMM PF00324. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.581 |
| CC_3126 | CC_3128 | Amino acid permease; Identified by match to PFAM protein family HMM PF00324. | TPR domain protein; Identified by match to protein family HMM. | 0.462 |
| CC_3127 | CC_0336 | TonB-dependent receptor; Identified by match to protein family HMM. | Major facilitator family transporter; Identified by match to protein family HMM. | 0.496 |
| CC_3127 | CC_0999 | TonB-dependent receptor; Identified by match to protein family HMM. | TonB-dependent receptor, putative; Similar to GP:9187833; identified by sequence similarity; putative. | 0.589 |
| CC_3127 | CC_1026 | TonB-dependent receptor; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.401 |
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