STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3174Conserved hypothetical protein; Identified by Glimmer2; putative. (372 aa)    
Predicted Functional Partners:
CC_3607
Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645.
  
  
 0.525
CC_3173
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM.
       0.522
CC_1223
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.518
CC_3175
Short chain dehydrogenase family protein; Identified by match to protein family HMM; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.495
CC_0537
PTS system, fructose-specific EIIA/HPr/EI components; Identified by match to protein family HMM.
  
  
 0.487
CC_3549
NADP-dependent malic enzyme; Identified by match to PFAM protein family HMM PF01515.
  
  
 0.479
CC_0448
PTS system, fructose-specific EIIA/HPr/EI components; Identified by match to protein family HMM.
     
 0.478
CC_2622
NADP-dependent malic enzyme; Identified by match to PFAM protein family HMM PF01515.
  
  
 0.459
CC_3214
Carbamoyl-phosphate synthase/carboxyl transferase; Identified by match to PFAM protein family HMM PF00289.
   
  
 0.429
CC_1906
Citrate synthase; Identified by match to protein family HMM; Belongs to the citrate synthase family.
  
  
 0.427
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.