STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3258Chemotaxis protein CheYIII; Identified by match to protein family HMM. (166 aa)    
Predicted Functional Partners:
CC_2971
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
  
 
 0.854
CC_2670
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
  
 
 0.853
CC_0652
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
  
 
 0.815
CC_3155
Chemotaxis protein CheYIII; Identified by match to protein family HMM.
  
 
 0.808
CC_0432
Chemotaxis protein CheYI; Identified by match to protein family HMM.
   
 
 0.782
CC_3259
CheE protein; Similar to GP:3757749; identified by sequence similarity; putative.
       0.773
CC_0437
Chemotaxis protein CheYII; Identified by match to protein family HMM.
      
 0.767
CC_3225
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
  
 
 0.765
CC_1364
Chemotaxis protein CheYIII; Identified by match to protein family HMM.
  
 
 0.758
CC_2501
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
  
 
 0.757
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.