Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC_3286Response regulator; Identified by match to protein family HMM. (119 aa)    
Predicted Functional Partners:
CC_2670
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 
 0.876
CC_2971
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 
 0.876
CC_0652
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 
 0.841
CC_2501
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 
 0.726
CC_2874
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 
 0.725
CC_3225
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 
 0.715
CC_3191
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 
 0.713
CC_2852
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 
 0.707
CC_0026
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 
 0.704
CC_2884
Sensor histidine kinase; Identified by match to protein family HMM.
 
 
 0.690
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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