STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3289Conserved hypothetical protein; Identified by Glimmer2; putative. (172 aa)    
Predicted Functional Partners:
CC_3290
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Identified by match to protein family HMM.
 
     0.850
CC_3288
Hypothetical protein; Identified by Glimmer2; putative.
       0.794
CC_0345
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.626
CC_0898
Flagellin, putative; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
    0.549
CC_1485
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.522
CC_2321
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.515
der
GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
   
    0.513
CC_3291
Hypothetical protein; Identified by Glimmer2; putative.
       0.509
flaEY
Regulatory protein FlaEY; Functions in trans to modulate the level of transcription of the flagellin genes and several genes encoding chemotaxis functions. It is itself temporally controlled.
  
    0.479
CC_1958
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM.
  
    0.453
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.